diff --git a/pipeline/abotyper.config b/pipeline/abotyper.config
new file mode 100644
index 000000000..2b37626e1
--- /dev/null
+++ b/pipeline/abotyper.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/abotyper custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/abotyper folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/alleleexpression.config b/pipeline/alleleexpression.config
new file mode 100644
index 000000000..299f60c46
--- /dev/null
+++ b/pipeline/alleleexpression.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/alleleexpression custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/alleleexpression folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/cellpainting.config b/pipeline/cellpainting.config
new file mode 100644
index 000000000..1afdb902a
--- /dev/null
+++ b/pipeline/cellpainting.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/cellpainting custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/cellpainting folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/deepmutscan.config b/pipeline/deepmutscan.config
new file mode 100644
index 000000000..e0ae23d62
--- /dev/null
+++ b/pipeline/deepmutscan.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/deepmutscan custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/deepmutscan folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/diseasemodulediscovery.config b/pipeline/diseasemodulediscovery.config
new file mode 100644
index 000000000..18674e1e8
--- /dev/null
+++ b/pipeline/diseasemodulediscovery.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/diseasemodulediscovery custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/diseasemodulediscovery folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/drop.config b/pipeline/drop.config
new file mode 100644
index 000000000..6ca97463a
--- /dev/null
+++ b/pipeline/drop.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/drop custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/drop folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/genomicrelatedness.config b/pipeline/genomicrelatedness.config
new file mode 100644
index 000000000..b28624c93
--- /dev/null
+++ b/pipeline/genomicrelatedness.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/genomicrelatedness custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/genomicrelatedness folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/longraredisease.config b/pipeline/longraredisease.config
new file mode 100644
index 000000000..b6ff1a01c
--- /dev/null
+++ b/pipeline/longraredisease.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/longraredisease custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/longraredisease folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/lsmquant.config b/pipeline/lsmquant.config
new file mode 100644
index 000000000..353ab3469
--- /dev/null
+++ b/pipeline/lsmquant.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/lsmquant custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/lsmquant folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/mitodetect.config b/pipeline/mitodetect.config
new file mode 100644
index 000000000..c88ddb1e1
--- /dev/null
+++ b/pipeline/mitodetect.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/mitodetect custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/mitodetect folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/pacsomatic.config b/pipeline/pacsomatic.config
new file mode 100644
index 000000000..ef1a92823
--- /dev/null
+++ b/pipeline/pacsomatic.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/pacsomatic custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/pacsomatic folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/panoramaseq.config b/pipeline/panoramaseq.config
new file mode 100644
index 000000000..1d9c0efcc
--- /dev/null
+++ b/pipeline/panoramaseq.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/panoramaseq custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/panoramaseq folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/proteinannotator.config b/pipeline/proteinannotator.config
new file mode 100644
index 000000000..bc5ca1422
--- /dev/null
+++ b/pipeline/proteinannotator.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/proteinannotator custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/proteinannotator folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/proteogenomicsdb.config b/pipeline/proteogenomicsdb.config
new file mode 100644
index 000000000..d97b1502a
--- /dev/null
+++ b/pipeline/proteogenomicsdb.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/proteogenomicsdb custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/proteogenomicsdb folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/rarevariantburden.config b/pipeline/rarevariantburden.config
new file mode 100644
index 000000000..e6a1bbc3f
--- /dev/null
+++ b/pipeline/rarevariantburden.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/rarevariantburden custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/rarevariantburden folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/ribomsqc.config b/pipeline/ribomsqc.config
new file mode 100644
index 000000000..257b0a0b6
--- /dev/null
+++ b/pipeline/ribomsqc.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/ribomsqc custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/ribomsqc folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/seqsubmit.config b/pipeline/seqsubmit.config
new file mode 100644
index 000000000..54b0d0674
--- /dev/null
+++ b/pipeline/seqsubmit.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/seqsubmit custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/seqsubmit folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/sopa.config b/pipeline/sopa.config
new file mode 100644
index 000000000..fc2af3bb1
--- /dev/null
+++ b/pipeline/sopa.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/sopa custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/sopa folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/variantprioritization.config b/pipeline/variantprioritization.config
new file mode 100644
index 000000000..7efe9689c
--- /dev/null
+++ b/pipeline/variantprioritization.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/variantprioritization custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/variantprioritization folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}
diff --git a/pipeline/viralmetagenome.config b/pipeline/viralmetagenome.config
new file mode 100644
index 000000000..16f30a053
--- /dev/null
+++ b/pipeline/viralmetagenome.config
@@ -0,0 +1,12 @@
+/*
+* -------------------------------------------------
+*  nfcore/viralmetagenome custom profile Nextflow config file
+* -------------------------------------------------
+* Config options for custom environments.
+* Cluster-specific config options should be saved
+* in the conf/pipeline/viralmetagenome folder and imported
+* under a profile name here.
+*/
+
+profiles {
+}