maj docs

Author: MatthieuGG

README.md

@@ -4,19 +4,20 @@
 
 Run the soft from terminal using ```python3 sf36.py [-d input_path] [-o output_path] [-ind]```  
 
-- `[-d]` optional, defines the path to your data. Default is [~/data/](https://github.com/MatthieuGG/SF36-scores/tree/main/data) in the same folder.  
-- `[-o]` optional, defines the path to your results. Default is [~/results/](https://github.com/MatthieuGG/SF36-scores/tree/main/results) in the same folder.  
-- `[-ind]` optional, saves individual files. Default is [one concatenated file](https://github.com/MatthieuGG/SF36-scores/blob/main/results/concatenated_results.csv).  
+- `[-d]` optional, defines the path to your data. Default is `/data` in the same folder.  
+- `[-o]` optional, defines the path to your results. Default is `/results` in the same folder.  
+- `[-ind]` optional, saves individual files. Default is one concatenated file.  
 
 You first have to go in the folder where sf36.py is located using `cd`. Exemple of use: 
 
-```
-> cd /Users/Me/Downloads/SF36-scores-main/  
-> python3 sf36.py -d /Users/Me/Documents/sf36/myData/ -o /Users/Me/Documents/sf36/myResults/ -ind
+```bash
+cd /Users/Me/Downloads/SF36-scores-main/
+
+python3 sf36.py -d /Users/Me/Documents/sf36/myData/ -o /Users/Me/Documents/sf36/myResults/ -ind
 ```
 
-See more information in the [documentation](https://github.com/MatthieuGG/SF36-scores/tree/main/documentation.pdf). 
-**WARNING: we use a version of the SF36 in which the order or the questions are different from original.** See an exemple [here](https://github.com/MatthieuGG/SF36-scores/tree/main/sample.pdf) to check your questions order. 
+See more information in the `/docs/documentation`. 
+**WARNING: we use a version of the SF36 in which the order or the questions are different from original.** See an exemple in `/docs/sample` to check your questions order. 
 We used the guidelines  ["SF36 Health Survey - Manual and Interpretation Guide" from John E. Ware, Jr. PhD](https://www.researchgate.net/publication/247503121_SF36_Health_Survey_Manual_and_Interpretation_Guide).
 
 **To cite this work:**