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Add release notes for v2.1.3
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documentation/source/users/rmg/releaseNotes.rst

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Release Notes
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RMG-Py Version 2.1.3
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====================
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Date: July 27, 2017
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- Thermo central database:
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- Framework for tracking and submitting species to a central database have been added
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- Following species submission, the central database will queue and submit quantum chemistry jobs for thermochemistry calculation
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- This is an initial step towards self-improving thermochemistry prediction
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- Rotor handling in Cantherm:
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- Free rotors can now be specified
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- Limit number of terms used when fitting hinder rotor scans
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- Fixed bug with ZPE calculation when using hindered rotors
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- New reaction degeneracy algorithm:
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- Use atom ID's to distinguish degenerate reactions from duplicates due to other factors
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- Degeneracy calculation now operates across all families rather than within each separately
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- Multiple transition states are now identified based on template comparisons and kept as duplicate reactions
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- Nodal distances:
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- Distances can now be assigned to trees in reaction families
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- This enables better rate averages with multiple trees
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- Fixed bug with finding the closest rate rule in the tree
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- New features:
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- Added methods for automatically writing RMG-database files
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- New symmetry algorithm improves symmetry number calculations for resonant and cyclic species
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- Group additivity algorithm updated to apply new long distance corrections
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- Specific colliders can now be specified for pressure-dependent rates
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- Very short superminimal example added (hydrogen oxidation) for checking basic RMG operation
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- Cantera now outputs a Chemkin file which can be directly imported into Chemkin
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- Fixes:
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- Fixed bug with negative activation energies when using Evans-Polanyi rates
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- Fixed walltime specification from command line when running RMG
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- Fixes and unit tests added for diffusionLimited module
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- Known issues:
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- The multiple transition state algorithm can result in undesired duplicate reactions for reactants with multiple resonance structures
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RMG-database Version 2.1.3
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==========================
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Date: July 27, 2017
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- Long-distance interaction thermo corrections:
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- The gauche and int15 group files have been replaced by longDistanceInteraction_noncyclic
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- New corrections for cyclic ortho/meta/para interactions are now available in longDistanceInteraction_cyclic
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- Changes:
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- Oa_R_Recombination family renamed to Birad_R_Recombination
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- More training reactions added for sulfur species in H_Abstraction
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- RMG-database tests have been moved to RMG-Py
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RMG-Py Version 2.1.2
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====================
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Date: May 18, 2017

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