Few tools for CellViT

[jermmy19998]

🧰 Few Tools for CellViT

This repository contains a few utility scripts to assist working with CellViT outputs.

🛠 Tools Included

1. split_svs.py
   Split large .svs whole slide images into 4 quadrants. This helps avoid memory or visualization issues on machines that can't handle very large images.

2. geojson_converter.py
   Modify the output .geojson files from CellViT so that they can be edited (e.g., fixing incorrect masks) in tools like QuPath.

3. convert_tiff2svs.py
   Rename or convert .tiff files to .svs format via simple suffix replacement for compatibility or visualization.

🔗 Related Link

CellViT helptools GitHub