Skip to content

Commit 5aa92f3

Browse files
authored
change cbiohub doc formatting
1 parent 6bb5ae3 commit 5aa92f3

File tree

1 file changed

+3
-3
lines changed

1 file changed

+3
-3
lines changed

README.md

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -2,14 +2,14 @@
22

33
**WARNING ⚠️: This package is still under construction.**
44

5-
`cbiohub` is a Python package and CLI tool designed to simplify the analysis of data from cBioPortal, including those hosted on the [cBioPortal Datahub](github.com/cbioPortal/datahub). Unlike existing API clients, which focus on slices of data via the REST API, `cbiohub` supports bulk analysis of harmonized datasets. By using combined parquet files instead of per-study CSV/TSV files, it enables faster data loading and querying.
5+
cbiohub is a Python package and CLI tool designed to simplify the analysis of data from cBioPortal, including those hosted on the [cBioPortal Datahub](github.com/cbioPortal/datahub). Unlike existing API clients, which focus on slices of data via the REST API, cbiohub supports bulk analysis of harmonized datasets. By using combined parquet files instead of per-study CSV/TSV files, it enables faster data loading and querying.
66

7-
`cbiohub` features:
7+
cbiohub features:
88

99
- A **data module** for ingesting and converting cBioPortal Datahub files into parquet format
1010
- An **analysis module** leveraging DuckDB for efficient local data exploration
1111

12-
With parquet’s widespread compatibility, `cbiohub` allows seamless integration with other programming languages and data warehousing tools.
12+
With parquet’s widespread compatibility, cbiohub allows seamless integration with other programming languages and data warehousing tools.
1313

1414
<img width="714" alt="image" src="https://github.com/user-attachments/assets/9a1c9a79-7336-49ce-89b1-43c5b614f0ea" />
1515

0 commit comments

Comments
 (0)