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I've found the "Agros Suite", which is using deal.II and Hermes as third party libraries.
As they are using the library, we should also put (part of) their work into the publication list. We need to check their publications and filter in which they use/refer to deal.II
http://www.agros2d.org/
http://www.agros2d.org/about/
Looks like they've been using it since 2014:
artap-framework/agrossuite@06a1e63
https://github.com/search?p=2&q=repo%3Aartap-framework%2Fagrossuite+deal.II&type=Commits
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