NeuroStrip

CNN based skull stripping (brain masking) from MRI.

Installation

For CPU support:

pip install neurostrip[cpu]

For GPU support:

pip install neurostrip[gpu]

Usage

neurostrip --image-path input.nii.gz --mask-path mask.nii.gz --masked-image-path output.nii.gz

Slicer Plugin

You can also try the tool in 3D Slicer. For installation instructions and more details, please refer to the GitHub repository.

Contributing

Contributions are welcome! See CONTRIBUTING.md for development setup and guidelines.

License

MIT License - see LICENSE file for details.