Update environment

Author: maxrjones

docker/environment.yml

@@ -25,10 +25,20 @@ dependencies:
   # Storage
   - "s3fs"
   - "obstore"
-  - "fsspec"
-  - "icechunk"
-  - "virtualizarr"
-  - "h5netcdf"
+  - "fsspec>=2025.7.0,<2025.11"
+  - "icechunk>=1.1.12"
+  - "virtualizarr>=2.2.1"
+  - "netCDF4>=1.7.2"
+  - "h5netcdf>=1.6.4,<1.8"
+  - "h5py>=3.14.0,<3.15"
+  - "zarr>=3.1.1,<3.2"
+
+  # Acceleration
+  - "bottleneck"
+  - "dask"
+  - "distributed"
+  - "numbagg"
+  - "flox"
 
   # geo
   - "gdal"
@@ -41,6 +51,8 @@ dependencies:
   - "odc-stac"
   - "ibis-duckdb"
   - "exactextract"
+  - "cftime"
+  - "pint"
 
   # geo viz
   - "jupytergis >=0.10.1"
@@ -69,7 +81,3 @@ dependencies:
 
   # Infrastructure
   - "jupyter-server-proxy"  # Enable proxying MyST sites built from CLI, accessed at `$PREFIX/proxy/$PORT`
-
-  - "pip"
-  - pip:  # Stuff not yet on conda forge
-    - "obspec-utils"

modules/04-data-in-the-cloud/pyproject.toml

@@ -18,16 +18,12 @@ dependencies = [
     "cartopy>=0.25.0",
     "numbagg>=0.9.0",
     "pint>=0.24.4",
-    "sparse>=0.17.0",
     "flox>=0.10.4",
     "h5netcdf>=1.6.4,<1.8",
     "h5py>=3.14.0,<3.15",
     "zarr>=3.1.1,<3.2",
     "fsspec>=2025.7.0,<2025.11",
-    "cubed-xarray>=0.0.8",
-    "cubed[diagnostics]>=0.23.0",
     "icechunk>=1.1.12",
-    "obspec-utils>=0.2.0",
     "obstore>=0.8.2",
     "s3fs>=2025.10.0",
     "virtualizarr>=2.2.1",