forked from Trustworthy-Software/TIML
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathmain_malscan.py
More file actions
359 lines (273 loc) · 17.1 KB
/
main_malscan.py
File metadata and controls
359 lines (273 loc) · 17.1 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
import os
import sys
import random
import torch
from torch.utils.data import DataLoader
# from torch.utils.tensorboard import SummaryWriter
import numpy as np
import argparse
import yaml
import pickle
import math
import time
import datetime
from dataloader_malscan import ExemplarIncrementalDataset, PureExemplarDataset, MultiExemplarDataset
from exemplar import gen_fixed_random_step_exemplar_set
from trainer import LwFTrainer, FinetuneTrainer, iCaRLTrainer, AFCTrainer, SSILTrainer, RandomTrainer, TIMLTrainer
from metrics import calculate_forgetting_score
trainer_dic = {'lwf': LwFTrainer, 'fine_tune': FinetuneTrainer, 'icarl': iCaRLTrainer,
'afc': AFCTrainer, 'ssil': SSILTrainer, 'random': RandomTrainer, 'timl': TIMLTrainer}
exemplar_strategy_dic = {'random': gen_fixed_random_step_exemplar_set}
class Logger(object):
def __init__(self, log_dir):
self.terminal = sys.stdout
current_time = datetime.datetime.now().strftime("%Y-%m-%d_%H-%M-%S")
self.log_file = open(os.path.join(log_dir, f"training_logs_{current_time}.txt"), "w")
def write(self, message):
self.terminal.write(message)
try:
self.log_file.write(message)
self.log_file.flush()
except Exception as e:
self.terminal.write(f"Error writing to log file: {e}\n")
def flush(self): # Needed for compatibility with Python 3
pass
def close(self): # Close the log file when done
self.log_file.close()
class TIMLTrainer:
def __init__(self, config, model, train_data, val_data, families_global_indices, hash_type, log_dir):
self.config = config
self.model = model
self.train_data = train_data
self.val_data = val_data
self.families_global_indices = families_global_indices
self.log_dir = log_dir
self.hash_type = hash_type
self.eval_res_dic = {"task_acc_in_each_step": [], "forgetting_score_in_each_step": [],
"avg_acc_known_classes": [], "weighted_avg_acc_known_classes": [],
"task_best_acc_list": [], "overall_weighted_avg_acc_steps_so_far": [],
"training_time_cost": [], "total_training_sample_number": [],
"exemplar_sample_number": [], "family_accs_in_each_step": [],
"overall_accuracy": [], "overall_acc_so_far": []}
# self.writer = SummaryWriter(log_dir=log_dir)
def train(self, num_steps):
# Redirect standard output to a log file
# sys.stdout = open(os.path.join(self.log_dir, "training_logs.txt"), "w")
sys.stdout = Logger(self.log_dir)
mapping_dict = {} #to ensure labels in the training are ordinal
inverse_mapping_dict = {} #to retrieve original labels back
incremental_nbr_new_classes = [0] #we assume that before step 0, we had 0 families
train_dataset = ExemplarIncrementalDataset(self.config, self.train_data, self.config['root_data_path'], families_global_indices,
"train", self.hash_type, self.config['mode'], self.config['img_norml'])
val_dataset = ExemplarIncrementalDataset(self.config, self.val_data, self.config['root_data_path'], families_global_indices,
"test", self.hash_type, "both", self.config['img_norml'])
if self.config['il_trainer'] == 'ssil':
if self.config['multi_exemplar']:
exemplar_dataset = MultiExemplarDataset(self.config, self.train_data, self.config['root_data_path'], families_global_indices,
"train", self.hash_type, self.config['mode'], self.config['img_norml'])
else:
exemplar_dataset = PureExemplarDataset(self.config, self.train_data, self.config['root_data_path'], families_global_indices,
"train", self.hash_type, self.config['mode'], self.config['img_norml'])
exemplars = None
device = torch.device('cuda')
for step in range(num_steps):
print("="*10+f"step {step+1} started"+"="*10)
start_time = time.time()
train_dataset.set_incremental_step(step)
val_dataset.set_incremental_step(step)
if self.config['il_trainer'] == 'ssil':
exemplar_dataset.set_incremental_step(step)
indices_test_end_step = val_dataset.indices_test_end_step
if int(self.config['exemplar_budget']):
if self.config['il_trainer'] == 'ssil':
exemplar_dataset._update_exemplars(exemplars)
self.eval_res_dic["total_training_sample_number"].append(len(train_dataset) + len(exemplar_dataset))
self.eval_res_dic["exemplar_sample_number"].append(len(exemplar_dataset))
else:
train_dataset._update_exemplars(exemplars)
self.eval_res_dic["total_training_sample_number"].append(len(train_dataset))
self.eval_res_dic["exemplar_sample_number"].append(len(train_dataset.exemplars))
else:
self.eval_res_dic["total_training_sample_number"].append(len(train_dataset))
self.eval_res_dic["exemplar_sample_number"].append(0)
train_dataloader = DataLoader(train_dataset, batch_size=self.config['batch_size'], shuffle=True, num_workers=4)
val_dataloader = DataLoader(val_dataset, batch_size=self.config['batch_size'], shuffle=False, num_workers=4)
exemplar_dataloader = None
if self.config['il_trainer'] == 'ssil' and step > 0:
self.config['exemplar_bs'] = math.ceil(self.config['batch_size'] * len(exemplar_dataset) / len(train_dataset)) # try to align the length the two iterator
exemplar_dataloader = DataLoader(exemplar_dataset,
batch_size=min(self.config['exemplar_bs'], exemplar_dataset.__len__()),
shuffle=True, num_workers=4)
training_classes_current_step = train_dataset.training_classes_current_step #global labels of new families in train
new_classes = [] #to save mapped labels from mapping_dict of new families
for i in range(len(training_classes_current_step)):
if training_classes_current_step[i] not in mapping_dict:
mapping_dict[training_classes_current_step[i]] = len(mapping_dict)
inverse_mapping_dict[len(mapping_dict)-1] = training_classes_current_step[i]
new_classes.append(mapping_dict[training_classes_current_step[i]])
print("new_classes", new_classes)
incremental_nbr_new_classes.append(len(new_classes)+incremental_nbr_new_classes[-1])
if not self.config['LSC'] and not (self.config['il_trainer'] == 'fine_tune' and self.config['shift_eval']):
self.model.incremental_classifier(len(mapping_dict))
trainer = trainer_dic[self.config['il_trainer']](config, step, self.model, device, self.log_dir)
if os.path.exists(f"{trainer.save_path}/model_step_{step}.pkl"):
print("*"*5+f"model_step_{step} exists! Evaluate it directly!"+"*"*5)
trainer.model = torch.load(f"{trainer.save_path}/model_step_{step}.pkl")
trainer.model.to(device)
self.model = trainer.model
else:
trainer.train(train_dataloader, exemplar_dataloader, mapping_dict, incremental_nbr_new_classes, num_steps, new_classes)
if int(self.config['exemplar_budget']):
if self.config['il_trainer'] == 'ssil':
exemplars = exemplar_strategy_dic[self.config['exemplar_strategy']](step,
self.config['exemplar_budget'],
exemplar_dataset, exemplars)
else:
exemplars = exemplar_strategy_dic[self.config['exemplar_strategy']](step,
self.config['exemplar_budget'],
train_dataset, exemplars)
# print('exemplar size: ', len(exemplars))
end_time = time.time()
elapsed_time = (end_time - start_time) / 60 # Convert to minutes
self.eval_res_dic["training_time_cost"].append(elapsed_time)
self.evaluate(trainer, val_dataloader, mapping_dict, inverse_mapping_dict,
step, incremental_nbr_new_classes, indices_test_end_step)
current_time = datetime.datetime.now().strftime("%Y-%m-%d_%H-%M-%S")
with open(f"{self.log_dir}/evaluation_results_{step}_{current_time}.json", "w") as f:
json.dump(self.eval_res_dic, f, indent=4)
# Close log file and reset standard output
sys.stdout.close()
sys.stdout = sys.__stdout__
def evaluate(self, trainer, val_dataloader, mapping_dict, inverse_mapping_dict, step, incremental_nbr_new_classes, indices_test_end_step):
def select_samples_of_first_step_families(images, labels, indices, incremental_nbr_new_classes):
selected_indices = torch.where(labels < incremental_nbr_new_classes[1])[0]
return images[selected_indices], labels[selected_indices], indices[selected_indices]
def select_samples_of_only_cur_step(images, labels, indices, indices_test_end_step, step):
selected_indices = np.where(indices >= indices_test_end_step[step-1])[0]
return images[selected_indices], labels[selected_indices]
self.model.eval()
val_total_samples = 0
val_correct_samples = {key: 0 for key in mapping_dict}
val_class_counts = {key: 0 for key in mapping_dict}
val_preds_list = []
val_labels_list = []
val_init_samp_indices_list = []
with torch.no_grad():
for i, (images, labels, indices) in enumerate(val_dataloader):
if self.config['il_trainer'] == 'fine_tune' and self.config['shift_eval']:
images, labels, indices = select_samples_of_first_step_families(images, labels, indices, incremental_nbr_new_classes)
if step > 0:
images, labels = select_samples_of_only_cur_step(images, labels, indices, indices_test_end_step, step)
if not len(images):
continue
preds = trainer.inference(images, inverse_mapping_dict)
val_total_samples += images.size(0)
val_preds_list.extend(preds.cpu().numpy())
val_labels_list.extend(labels.cpu().numpy())
val_init_samp_indices_list.extend(indices.cpu().numpy())
for j in range(labels.size(0)):
label = labels[j].item()
if label in mapping_dict:
val_class_counts[label] += 1
if preds[j] == label:
val_correct_samples[label] += 1
overall_accuracy = len([i for i in range(len(labels)) if labels[i] == preds[i]])/len(labels) if len(labels) else np.nan
step_accuracies = {}
for k in mapping_dict:
if val_class_counts[k] != 0:
accuracy = val_correct_samples[k] / val_class_counts[k]
else:
# import ipdb; ipdb.set_trace()
accuracy = 0
step_accuracies[k] = accuracy
weights = [val_class_counts[k] for k in mapping_dict]
self.eval_res_dic['family_accs_in_each_step'].append(step_accuracies)
avg_class_acc = np.average(list(step_accuracies.values()))
weighted_avg_class_acc = np.average(list(step_accuracies.values()), weights=weights)
preds_mapped = [mapping_dict[i] for i in val_preds_list]
labels_mapped = [mapping_dict[i] if i in mapping_dict else -1 for i in val_labels_list]
if self.config['il_trainer'] == 'fine_tune' and self.config['shift_eval']:
forgetting_score, task_acc_list = 0, self.eval_res_dic["task_best_acc_list"]
else:
forgetting_score, task_acc_list = calculate_forgetting_score(step, preds_mapped, labels_mapped,
self.eval_res_dic["task_best_acc_list"],
incremental_nbr_new_classes,
val_init_samp_indices_list, indices_test_end_step)
if forgetting_score is not None:
self.eval_res_dic["forgetting_score_in_each_step"].append(forgetting_score)
self.eval_res_dic["task_acc_in_each_step"].append(task_acc_list)
self.eval_res_dic["avg_acc_known_classes"].append(avg_class_acc)
self.eval_res_dic["weighted_avg_acc_known_classes"].append(weighted_avg_class_acc)
self.eval_res_dic["overall_accuracy"].append(overall_accuracy)
# self.eval_res_dic["overall_acc_so_far"].append(np.average(self.eval_res_dic["overall_accuracy"]))
self.eval_res_dic["overall_acc_so_far"].append(np.nanmean(self.eval_res_dic["overall_accuracy"]))
self.eval_res_dic["overall_weighted_avg_acc_steps_so_far"].append(np.average(self.eval_res_dic["weighted_avg_acc_known_classes"]))
#self.eval_res_dic["task_best_acc_list"].append(task_best_acc_list)
print(f"Average accuracy known classes: {avg_class_acc}")
print(f"Weighted average accuracy known classes: {weighted_avg_class_acc}")
print("Overall weighted average accuracy over all history steps so far: ",
np.average(self.eval_res_dic["weighted_avg_acc_known_classes"]))
print("Forgetting_score_in_step", forgetting_score)
print("Overall average forgetting over all history steps so far: ",
np.average(self.eval_res_dic["forgetting_score_in_each_step"]))
def set_random_seeds(seed_value):
random.seed(seed_value)
np.random.seed(seed_value)
torch.manual_seed(seed_value)
torch.cuda.manual_seed(seed_value)
torch.backends.cudnn.deterministic = True
torch.backends.cudnn.benchmark = False
def parse_args():
parser = argparse.ArgumentParser(description="Experiment Settings")
parser.add_argument('--exp_setting', type=str, required=True, help='Path to the YAML configuration file')
return parser.parse_args()
def load_config(config_path):
with open(config_path, 'r') as file:
config = yaml.safe_load(file)
return config
if __name__ == "__main__":
import os
from model import CILNet, MalscanTIML
import json
import shutil
import glob
from pathlib import Path
args = parse_args()
config_path = args.exp_setting
config = load_config(config_path)
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
os.environ["CUDA_VISIBLE_DEVICES"]= str(config['gpu_id'])
seed = config['random_seed']
set_random_seeds(seed)
with open(config['train_set_json'], 'r') as f:
train_data = json.load(f)
with open(config['test_set_json'], 'r') as f:
val_data = json.load(f)
with open(config['hash_type_dict'], 'rb') as f:
hash_type = pickle.load(f)
init_num_classes = len(train_data['step=0']) # The initial number of classes
num_steps = len(train_data)
log_dir = f'logs/{config["exp_tag"]}_seed{seed}_init-num{init_num_classes}_bs{config["batch_size"]}_lr{config["learning_rate"]}_step{num_steps}_epoch{config["num_epochs"]}_res18weights-{config["res18_weights"]}'
if config['img_norml']:
log_dir += '_w_img_nomrl'
# Make sure the log directory exists
if not os.path.exists(log_dir):
os.makedirs(log_dir)
shutil.copy(config_path, log_dir)
# Copy all .py files from the current directory to the destination directory
for file_path in Path('.').glob('*.py'):
shutil.copy(file_path, log_dir)
# Initialize the model
if config["timl_backbone"]:
model = MalscanTIML()
else:
model = CILNet(init_num_classes, config['res18_weights'], config['LSC'])
# Initialize the trainer
families_global_indices = {}
trainer = TIMLTrainer(config, model, train_data, val_data, families_global_indices, hash_type, log_dir)
# Train the model
trainer.train(num_steps)
with open(f"{log_dir}/evaluation_results.json", "w") as f:
json.dump(trainer.eval_res_dic, f, indent=4)
with open(f"{log_dir}/families_global_indices.json", "w") as f:
json.dump(families_global_indices, f, indent=4)