InterOp QC for Illumina runs

[matthdsm]

Description of feature

Use the InterOp utilities to check run and demux performance before running the rest of the pipeline

TODO:

• Write InterOp modules
• Define criteria for run pass/fail
• Define criteria for sample pass/fail
• Add workflow logic to fail early but gracefully when QC doesn't pass

xref: https://github.com/Molmed/checkQC

[matthdsm]

Generate Run QC report -> https://github.com/MultiQC/MultiQC_SAV

[matthdsm]

Maybe add custom handling post demux for early reporting:
https://github.com/nextflow-io/nextflow/blob/66b743836d5e5ec6a6cb6a36689ae45070cdbeec/modules/nextflow/src/main/groovy/nextflow/trace/TraceObserverV2.groovy#L70