sphae/pyproject.toml at main · npbhavya/sphae · GitHub

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[build-system]
requires = ["setuptools>=69", "setuptools_scm", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "sphae"
version = "1.5.4"  # Update as appropriate
description = "Phage workflow"
readme = { file = "README.md", content-type = "text/markdown" }
authors = [
    { name = "Bhavya Papudeshi", email = "npbhavya13@gmail.com" }
]
license = { text = "MIT" }
keywords = ["phage", "phage therapy", "bioinformatics", "microbiology",  "genome", "genomics"]
classifiers = [
    "Environment :: Console",
    "Environment :: MacOS X",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Natural Language :: English",
    "Operating System :: POSIX :: Linux",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Bio-Informatics"
]
requires-python = ">=3.9"
dependencies = [
    "snaketool-utils>=0.0.5",
    "snakemake>=8.28.0",
    "pyyaml>=6.0",
    "Click==8.1.3",
    "metasnek>=0.0.8",
    "attrmap>=0.0.7",
    "biopython>=1.8.1",
    "pandas",
    "matplotlib",
    "snakemake-executor-plugin-slurm>=0.5.1"
]

[project.scripts]
sphae = "sphae.__main__:main"

[tool.setuptools]
packages = ["sphae"]