Repositories list

• afni_doc

  Public
  Documentation for the AFNI package (mainly RST to build HTML docs)

  Shell

  •2•3•0•1•Updated Nov 26, 2025Nov 26, 2025

• aproject_anplab_mefmri

  Public
  Scripts for ME-FMRI processing with AFNI.

  Shell

  •0•0•0•0•Updated Nov 25, 2025Nov 25, 2025

• afni

  Public
  Official AFNI source and documentation

  visualizationquality-controlstatistics+ 7mristatistical-inferencefmridwianatomical-mrifmri-data-analysisfmri-analysis

  C

  •

  Other

  •111•180•53•36•Updated Nov 24, 2025Nov 24, 2025

• afni_edu_scripts

  Public
  scripts used in AFNI class data trees, plus support/initializing scripts

  Shell

  •0•0•0•1•Updated Sep 22, 2025Sep 22, 2025

• apaper_DAG2

  Public
  0•0•0•0•Updated Sep 11, 2025Sep 11, 2025

• docker_v1

  Public
  start of notes for building AFNI docker more directly+simply

  Shell

  •0•1•0•0•Updated Aug 19, 2025Aug 19, 2025

• nifti_docs

  Public
  NIFTI documentation

  Python

  •0•0•0•0•Updated Aug 18, 2025Aug 18, 2025

• apmulti_scripts

  Public
  Shell

  •0•0•0•0•Updated Aug 15, 2025Aug 15, 2025

• aproject_gall_proc

  Public
  Scripts for task FMRI data processing

  Shell

  •0•0•0•0•Updated Jun 2, 2025Jun 2, 2025

• apaper_gofigure_salmon

  Public
  A set of processing scripts for the publicly available salmon data used in the "Go Figure" draft.

  Shell

  •0•0•0•0•Updated Mar 13, 2025Mar 13, 2025

• apaper_afni_proc

  Public
  Scripts to accompany processing examples in AFNI's afni_proc.py methods description.

  Shell

  •2•3•0•0•Updated Dec 17, 2024Dec 17, 2024

• apaper_heritability

  Public
  0•0•0•0•Updated Sep 6, 2024Sep 6, 2024

• afni_proc_simple_bids_app

  Public
  First draft of making an afni_proc.py BIDS-App with "simple" afni_proc.py processing

  Shell

  •1•1•2•0•Updated Aug 15, 2024Aug 15, 2024

• qc-demo-repo

  Public
  afni_proc.py quality control (APQC) HTML demo

  JavaScript

  •0•0•0•0•Updated Aug 1, 2024Aug 1, 2024

• apaper_apqc_etal

  Public
  These scripts were used to process the dataset used to demo quality control (QC) tools in AFNI (Taylor et al., 2024).

  Shell

  •0•0•0•0•Updated May 17, 2024May 17, 2024

• apaper_rtms_fmri_stroop

  Public
  Shell

  •0•0•0•0•Updated May 17, 2024May 17, 2024

• apaper_DAG1

  Public
  0•1•0•0•Updated Jan 10, 2024Jan 10, 2024

• apaper_highlight_narps

  Public
  Scripts related to the paper

  Shell

  •1•5•0•0•Updated Jul 19, 2023Jul 19, 2023

• apaper_afniqc_frontiers

  Public
  Scripts accompanying the "Demonstrating Quality Control (QC) Procedures in fMRI" project

  Shell

  •

  BSD 2-Clause "Simplified" License

  •0•4•0•0•Updated Jul 14, 2023Jul 14, 2023

• test_ricor

  Public
  Shell

  •0•0•0•0•Updated Apr 7, 2023Apr 7, 2023

• afni_ci_test_data

  Public
  Roff

  •2•1•0•1•Updated Mar 23, 2023Mar 23, 2023

• apaper_hrf_profiles

  Public
  Scripts accompanying Chen et al. (2022/3) work on modeling, visualizing and understanding FMRI hemodynamic response.

  Shell

  •1•0•0•0•Updated Feb 15, 2023Feb 15, 2023

• add-afni-tutorials

  Public
  OHBM-2022 Brainhack project idea: Adding to AFNI tutorials

  0•0•0•0•Updated Jun 14, 2022Jun 14, 2022

• ap_bids_deriv_names

  Public
  OHBM-2022 Brainhack project idea: BIDS derivatives naming for afni_proc.py output

  0•0•0•0•Updated Jun 14, 2022Jun 14, 2022

• ademo_MACAQUE_DEMO_REST

  Public
  scripts for AFNI's MACAQUE_DEMO_REST

  Shell

  •0•0•0•0•Updated Nov 15, 2021Nov 15, 2021

• ademo_MACAQUE_DEMO

  Public
  scripts and text files used in creating+distributing AFNI's MACAQUE_DEMO

  Shell

  •0•0•0•0•Updated Nov 15, 2021Nov 15, 2021

• fitlins

  Public
  Fit Linear Models to BIDS Datasets

  Python

  •

  Apache License 2.0

  •34•0•0•0•Updated Nov 18, 2020Nov 18, 2020

• afnistats

  Public
  A place to iterate on an attempt at packaging afni's R code

  R

  •0•1•0•0•Updated Jun 12, 2020Jun 12, 2020

• afni_data

  Public
  0•0•0•0•Updated Jan 29, 2020Jan 29, 2020

• Staff_scientist_position_available

  Public
  job advert **not currently on offer**

  jobsneurosciencemri+ 7brain-imagingnihafnissccstaff-positiondata-scientist-positionmri-analysis

  0•0•0•0•Updated Jan 21, 2020Jan 21, 2020