cellmatch/pyproject.toml at main · vislearn/cellmatch · GitHub

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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "cellmatch"
version = "0.1.0"
description = "Toolkit for 3D cell matching tasks."
authors = [
    { name = "Sebastian Stricker",  email = "sebastian.stricker@iwr.uni-heidelberg.de" },
    { name = "Christoph Karg",      email = "christoph.karg@mdc-berlin.de" },
    { name = "Lisa Hutschenreiter", email = "lisa.hutschenreiter@iwr.uni-heidelberg.de" }
]
readme = "README.md"
license = { file = "LICENSE" }
requires-python = ">=3.8"
dependencies = [
    "pylibmgm",
    "numpy",
    "scipy",
    "numba",
    "pandas",
    "tqdm",
    "optuna",
]

[project.urls]
Repository = "https://github.com/vislearn/cellmatch"
Issues = "https://github.com/vislearn/cellmatch/issues"

[project.optional-dependencies]
test = [
    "pytest>=7.0",
    "pytest-cov>=4.0",
]

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]
python_classes = ["Test*"]
python_functions = ["test_*"]
addopts = [
    "-v",
    "-s",
    "--tb=short"
]