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Test multi-region rendering with linked reads display

enhancementNew feature or requestNew feature or request

Status: Open.

#5225 In GMOD/jbrowse-components;

· cmdcolin opened on Nov 15, 2025

BAM Pileup settings - Color by - Pair orientation do not work

bugSomething isn't workingSomething isn't working

Status: Open.

#5219 In GMOD/jbrowse-components;

· lldelisle opened on Nov 14, 2025

Trouble getting sequence from selection

Status: Open.

#5216 In GMOD/jbrowse-components;

· diego-rt opened on Nov 13, 2025

Initialize pluginManager without any tracks loaded at first, and then load rest of config secondarily

enhancementNew feature or requestNew feature or request

Status: Open.

#5215 In GMOD/jbrowse-components;

· cmdcolin opened on Nov 12, 2025

When summaryScoreMode is "mean" then use the maximum mean value for scale calculation in bigwig tracks

enhancementNew feature or requestNew feature or request

Status: Open.

#5181 In GMOD/jbrowse-components;

· cmdcolin opened on Oct 20, 2025

Potential Off-by-one error showing translocation VCF breakends in breakpoint split view

bugSomething isn't workingSomething isn't working

Status: Open.

#5180 In GMOD/jbrowse-components;

· cmdcolin opened on Oct 20, 2025

Handle 'out of frame' exon in BRAF GENCODE data

bugSomething isn't workingSomething isn't working

Status: Open.

#5176 In GMOD/jbrowse-components;

· cmdcolin opened on Oct 13, 2025

Add ability to right click a specific location on the alignments track screen to "sort by"

enhancementNew feature or requestNew feature or request

Status: Open.

#5167 In GMOD/jbrowse-components;

· cmdcolin opened on Sep 25, 2025

Create simplified session spec for launching synteny views

enhancementNew feature or requestNew feature or request

Status: Open.

#5160 In GMOD/jbrowse-components;

· cmdcolin opened on Sep 12, 2025

Add --adapterType for jbrowse CLI

bugSomething isn't workingSomething isn't working

Status: Open.

#5154 In GMOD/jbrowse-components;

· adaware-lilly opened on Sep 8, 2025

Unable to search for gene IDs in GFF3 files

bugSomething isn't workingSomething isn't working

Status: Open.

#5151 In GMOD/jbrowse-components;

· snowsnowing opened on Aug 30, 2025

JBrowse issue: "bad file descriptor"

Status: Open.

#5150 In GMOD/jbrowse-components;

· kew24 opened on Aug 28, 2025