scripts

Collection of curated scripts from the Morin Lab

Name		Name	Last commit message	Last commit date
Latest commit History 368 Commits
augment_manta_vcf		augment_manta_vcf
augment_ssm/1.0		augment_ssm/1.0
calc_manta_vaf/1.0		calc_manta_vaf/1.0
cnv2igv		cnv2igv
crossmap		crossmap
deblacklist_maf		deblacklist_maf
envs		envs
fill_segments		fill_segments
filter_vcf/1.0		filter_vcf/1.0
find_noncanonical_transcripts		find_noncanonical_transcripts
generate_igv_batch		generate_igv_batch
generate_smg_inputs		generate_smg_inputs
generate_smr_inputs/1.0		generate_smr_inputs/1.0
get_bams		get_bams
liftover		liftover
query_api/1.0		query_api/1.0
salmon2counts/1.0		salmon2counts/1.0
sra-tools/1.0		sra-tools/1.0
.gitignore		.gitignore
README.md		README.md

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