snakemake pipeline #34
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test to ensure sensitive things do not get uploaded
because cron gives us a clean environment. Create FTPS sentinel file.
Fix docformatter errors in place, and stop ruff and docformatter from fighting with each other.
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skeating
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Jan 27, 2026
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I couldn't get it running locally and I certainly couldn't find a 'tools' directory as given in it develop.md file
I think this could be filed as an issue to revisit if we have time; so not a blocker
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Interesting, @thompson318 is that your script and did you intend to commit it to this repo? |
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Implements #29 and fixes #26.
Snakemake is run according to a cron specification (default is once a day in the early hours of the morning).
It causes the CSVs output by the waveform-controller to be converted to both kinds of parquet, and then the de-id parquet to be uploaded to the DSH, leaving behind marker files with upload stats so that snakemake knows they are done, and so do the humans!
Toy hasher needed a fix because Python's
hashmethod is not stable from run to run. (Switch to using real hasher is in #35)Also add a pipeline debugging guide.