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ChIPseeker annotation: adding a "multiple" category if a cluster overlaps with multiple features (e.g. exons and introns)

Status: Open.

#260 In YuLab-SMU/ChIPseeker;

· santataRU opened on Sep 8, 2025

ChIPseeker configurations for custom annotations

Status: Open.

#259 In YuLab-SMU/ChIPseeker;

· santataRU opened on Sep 7, 2025

Some problem about Chipseeker 1.44

Status: Open.

#258 In YuLab-SMU/ChIPseeker;

· helloworldABCD1234 opened on Aug 11, 2025

sameStrand=TRUE in annotatePeak not working properly

Status: Open.

#257 In YuLab-SMU/ChIPseeker;

· helloworldABCD1234 opened on Aug 8, 2025

Inconsistent annotation

Status: Open.

#255 In YuLab-SMU/ChIPseeker;

· lucolotto opened on May 14, 2025

<code>downloadGEObedFiles()</code> FTP Download errors and make modifications

Status: Open.

#254 In YuLab-SMU/ChIPseeker;

· sunv28 opened on Mar 21, 2025

how to add title to plotAnnoPie

Status: Open.

#253 In YuLab-SMU/ChIPseeker;

· cxtaslim opened on Mar 20, 2025

annotation cols is different with transcriptId cols

Status: Open.

#252 In YuLab-SMU/ChIPseeker;

· teryyoung opened on Mar 17, 2025

Parts of peaks isnt annotated. length of annotated object is short than peakfiles.

Status: Open.

#251 In YuLab-SMU/ChIPseeker;

· teryyoung opened on Mar 15, 2025

Error in cursor:(cursor + seq - 1) : result would be too long a vector running plotPeakProf2

Status: Open.

#250 In YuLab-SMU/ChIPseeker;

· johannesnicolaus opened on Jan 22, 2025

How to get same Y axis range for plotAvgProf

Status: Open.

#249 In YuLab-SMU/ChIPseeker;

· Krithika-Bhuvan opened on Dec 18, 2024

chipseeker se2gene not working

Status: Open.

#248 In YuLab-SMU/ChIPseeker;

· ICE0584 opened on Dec 16, 2024