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@bartongroup

Geoff Barton's Computational Biology Group

Codes from Geoff Barton's group and the Data Analysis Group (DAG) headed by Dr James Abbott.

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  1. Proteus Proteus Public

    R package for analysing proteomics data

    R 50 3

  2. RATS RATS Public

    Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.

    R 34 1

  3. 2passtools 2passtools Public

    Two pass alignment for long reads

    Python 22 1

  4. LBS-comparison LBS-comparison Public

    This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools

    Jupyter Notebook 17 3

  5. AlmostSignificant AlmostSignificant Public

    A server for maintaining high-throughput sequencing QC data

    Python 13

  6. yanocomp yanocomp Public

    Yet another nanopore modification comparison tool

    Python 12 1

Repositories

Showing 10 of 86 repositories
  • PT_qiime_runner_v1 Public
    bartongroup/PT_qiime_runner_v1’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 17, 2025
  • MG_Cdk46 Public

    Mechanisms of action of small molecule inhibitors against cyclin dependent kinases 4 and 6 (CDK4/6) (Ly)

    bartongroup/MG_Cdk46’s past year of commit activity
    R 0 0 0 0 Updated Dec 15, 2025
  • DRSASP-Kinomer Public
    bartongroup/DRSASP-Kinomer’s past year of commit activity
    HTML 1 0 0 0 Updated Nov 12, 2025
  • ProteoFAV Public

    Open-source framework for simple and fast integration of protein structure data with sequence annotations and genetic variation

    bartongroup/ProteoFAV’s past year of commit activity
    Python 4 MIT 0 13 0 Updated Nov 12, 2025
  • slivka-python-client Public
    bartongroup/slivka-python-client’s past year of commit activity
    Python 3 Apache-2.0 0 3 0 Updated Nov 7, 2025
  • dexdash Public

    Interactive explorer for differential expression analysis centred on the volcano plot. Features fast functional enrichment.

    bartongroup/dexdash’s past year of commit activity
    R 2 0 0 0 Updated Nov 5, 2025
  • JCA_NSW_comQXPA_rapP Public

    comQXPA and rapP genomic analysis

    bartongroup/JCA_NSW_comQXPA_rapP’s past year of commit activity
    Python 0 0 0 0 Updated Oct 27, 2025
  • MG_BSubComp Public

    Transcriptomic changes in ΔcomA and ΔrapA mutants in Bacillus subtilis (Stanley-Wall)

    bartongroup/MG_BSubComp’s past year of commit activity
    R 0 0 0 0 Updated Oct 27, 2025
  • Colabfold_batch_installer Public

    Automated colabfold installation for UoD HPC Cluster

    bartongroup/Colabfold_batch_installer’s past year of commit activity
    Shell 1 0 1 0 Updated Oct 7, 2025
  • SACK1G-analysis Public

    This is a GitHub Repository containing the data and code used for an structural analysis of FAM83G and FAM83G-CK1A 3D models

    bartongroup/SACK1G-analysis’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 25, 2025
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