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Add output:flush_frequency for OptionsNetCDF
#2934
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Appears on include guard instead of class
Avoids rewriting time-independent data, gives slight performance boost
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clang-tidy made some suggestions
* next: (563 commits)
Bump DOI
Add shim for ARKodeGetNumRhsEvals
Suppress warning from `nodiscard` function
Remove `boututils` from requirements; bump `boutdata`
Fix deprecation warning
Bump bundled fmt
Fix some easy clang-tidy snes warnings
Fix reorder warning from snes
CI: Don't run clang-{tidy,format} on RC branches
Update changelog
Bump version to 5.2.0
Tweak version updater, mention in docs
Add dependencies to changelog updater
Add new authors
Tweak citations updater, mention in docs
Update translations
Fix testCommandLineOptionsArePrinted
Apply black changes
Prevent SignalHandlerTestDeathTest when OS is FreeBSD
Use the portable "/usr/bin/env bash" shebang instead of "/bin/bash"
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clang-tidy made some suggestions
| }; | ||
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| /// Set timestep counter for flushing file | ||
| void setFlushCounter(std::size_t iteration) { flush_counter = iteration; } |
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warning: no header providing "std::size_t" is directly included [misc-include-cleaner]
include/bout/physicsmodel.hxx:34:
- class PhysicsModel;
+ #include <cstddef>
+ class PhysicsModel;
Sort of fixes #2878
Two things:
output:flush_frequencycan be used to reduce how often netCDF data is flushed to disk (maybeflush_periodis a more accurate name?)Optionsused to store data to be written to disk is now reset after writingThese two together can significantly cut the time spent in IO:
(absolute time from the
iotimer forconductionexample for 500 timesteps, rolling average over 100 steps)The red line is basically current
nextI'm a bit concerned that we still get an increase over time, but this seems to unavoidable.
This PR also includes some drive-by fixes for some minor
OptionsIOissues.