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Update tests workflow to bring into line with general #2503

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Merged
jeromekelleher merged 1 commit into from
Feb 26, 2026
Merged

Update tests workflow to bring into line with general #2503

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16 changes: 11 additions & 5 deletions .github/workflows/tests.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -41,6 +41,7 @@ jobs:
defaults:
run:
shell: bash

steps:
- name: Cancel Previous Runs
uses: styfle/cancel-workflow-action@0.13.0
Expand Down Expand Up @@ -89,18 +90,23 @@ jobs:
run: uv sync --locked --group test --no-default-groups

- name: Build module
run: uv run --no-default-groups python setup.py build_ext --inplace
run: uv run --locked --no-default-groups python setup.py build_ext --inplace

- name: Fix windows gsl dlls
if: matrix.os == 'windows-latest'
run: cp /c/vcpkg/installed/x64-windows/bin/gsl*.dll msprime/

- name: Run tests
run: uv run --no-default-groups pytest --cov=msprime --cov-report=xml --cov-branch -n2
run: |
uv run --locked --no-default-groups pytest --cov=msprime \
--cov-report=xml --cov-branch -n2

- name: Upload coverage to Codecov
uses: codecov/codecov-action@v5.4.0
uses: codecov/codecov-action@v5.5.2
with:
token: ${{ secrets.CODECOV_TOKEN }}
flags: python
fail_ci_if_error: true
fail_ci_if_error: false
flags: python-tests
files: coverage.xml
disable_search: true
verbose: true